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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
Hi-C
Assay category
2
3D chromatin structure
Date released
1
August, 2021
1
November, 2019
Available data
116
bam
104
fastq
63
bigWig
43
bed narrowPeak
32
bigBed narrowPeak
15
tsv
12
bed broadPeak
12
bigBed broadPeak
4
tagAlign
3
tar
2
bedpe bed3+
2
hic
1
bed bed3+
1
txt
1
vcf
Organism
2
Homo sapiens
Biosample type
11
tissue
5
primary cell
4
in vitro differentiated cells
2
cell line
Organ
1
epithelium
1
liver
1
pancreas
Project
2
AMP
Genome assembly (visualization)
2
hg19
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
target.investigated_as!
histone
BIOSAMPLE
ASSAY
2 results
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Hi-C
cell line
EndoC_BH1
1
HepG2
1
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