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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
7
WGBS
6
RRBS
3
DNase-seq
1
FAIRE-seq
Assay category
49
DNA binding
13
DNA methylation
4
DNA accessibility
Target of assay
histone
96
histone modification
60
broad histone mark
48
control
36
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
210
August, 2021
200
May, 2022
170
February, 2023
147
February, 2021
126
May, 2020
111
November, 2017
80
October, 2019
69
May, 2021
66
August, 2017
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
16
December, 2017
16
January, 2021
15
April, 2019
10
November, 2020
9
November, 2018
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
3
October, 2017
1
August, 2018
1
August, 2022
1
September, 2018
Available data
38
fastq
33
bam
11
tagAlign
5
bigWig
4
bed bedMethyl
4
bed narrowPeak
4
bigBed bedMethyl
4
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
Organism
65
Homo sapiens
Biosample type
42
tissue
17
primary cell
7
in vitro differentiated cells
Organ
22
pancreas
17
connective tissue
15
liver
12
epithelium
10
adipose tissue
7
musculature of body
Project
66
AMP
Genome assembly (visualization)
154
hg19
GRCh38
Lab
66
AMP-T2D consortium
assembly!
GRCh38
target.investigated_as!
histone
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
FAIRE-seq
tissue
liver
10
3
1
islet of Langerhans
7
1
subcutaneous abdominal adipose tissue
5
3
skeletal muscle tissue
3
4
adipose tissue
1
1
+ See 2 more…
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
1
2
in vitro differentiated cells
adipocyte
7
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