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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
68
histone
68
histone modification
48
transcription factor
36
broad histone mark
32
narrow histone mark
20
control
6
RNA binding protein
2
chromatin remodeller
Date released
20
May, 2021
12
August, 2017
2
October, 2019
1
August, 2021
1
November, 2017
Available data
45
tagAlign
36
bigWig
33
bed narrowPeak
15
bed broadPeak
6
bam
3
bigBed broadPeak
2
fastq
Organism
36
Homo sapiens
Biosample type
22
primary cell
12
tissue
2
cell line
Organ
8
musculature of body
4
pancreas
2
blood vessel
2
epithelium
2
liver
2
vasculature
2
vein
Project
36
AMP
Genome assembly (visualization)
GRCh38
371
hg19
Lab
20
Kyle Gaulton, UCSD
15
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent control read length
assembly!
GRCh38
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
primary cell
CD8-positive, alpha-beta T cell
20
endothelial cell of umbilical vein
2
tissue
skeletal muscle tissue
8
islet of Langerhans
4
cell line
HepG2
2
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