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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
ChIP-seq
Assay category
159
DNA binding
Target of assay
322
control
159
histone
159
histone modification
82
narrow histone mark
77
broad histone mark
54
transcription factor
9
RNA binding protein
5
nucleotide modification
2
chromatin remodeller
1
recombinant protein
Date released
96
August, 2017
May, 2021
27
October, 2019
15
November, 2017
8
May, 2020
6
October, 2017
4
August, 2021
1
April, 2019
1
December, 2017
1
May, 2019
Available data
84
tagAlign
38
bigWig
34
bed narrowPeak
25
bed broadPeak
18
bam
4
bigBed broadPeak
4
fastq
1
bigBed narrowPeak
Organism
159
Homo sapiens
Biosample type
134
tissue
14
in vitro differentiated cells
6
cell line
5
primary cell
Organ
44
connective tissue
33
liver
31
adipose tissue
20
musculature of body
19
brain
15
pancreas
5
blood vessel
5
epithelium
5
vasculature
5
vein
4
gonad
4
ovary
2
eye
2
limb
1
embryo
1
heart
1
lymph node
Project
159
AMP
Genome assembly (visualization)
GRCh38
667
hg19
Lab
156
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
2
inconsistent control read length
assembly!
GRCh38
month_released!
May, 2021
BIOSAMPLE
ASSAY
159 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
35
subcutaneous abdominal adipose tissue
31
liver
28
skeletal muscle tissue
19
brain
6
+ See 7 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
1
pancreatic endoderm
1
cell line
HepG2
5
Panc1
1
primary cell
endothelial cell of umbilical vein
5
See all biosamples
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