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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
299
control
179
histone
179
histone modification
90
broad histone mark
89
narrow histone mark
54
transcription factor
9
RNA binding protein
5
nucleotide modification
2
chromatin remodeller
1
recombinant protein
Date released
32
August, 2017
22
October, 2019
12
May, 2021
10
November, 2017
8
May, 2020
2
August, 2021
1
April, 2019
1
May, 2019
1
October, 2017
Available data
35
tagAlign
32
bigWig
31
bed narrowPeak
11
bam
10
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
fastq
Organism
89
Homo sapiens
Biosample type
73
tissue
in vitro differentiated cells
13
primary cell
3
cell line
Organ
19
liver
12
connective tissue
11
adipose tissue
10
brain
8
musculature of body
6
pancreas
4
gonad
4
ovary
2
eye
2
limb
1
blood vessel
1
epithelium
1
heart
1
lymph node
1
vasculature
1
vein
Project
89
AMP
Genome assembly (visualization)
371
hg19
GRCh38
Lab
77
AMP-T2D consortium
10
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
Audit category:
1
inconsistent control read length
assembly!
GRCh38
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
27
liver
16
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
cingulate gyrus
4
+ See 7 more…
primary cell
CD8-positive, alpha-beta T cell
10
endothelial cell of umbilical vein
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
cell line
HepG2
3
See all biosamples
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