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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
68
histone
68
histone modification
48
transcription factor
36
broad histone mark
32
narrow histone mark
20
control
6
RNA binding protein
2
chromatin remodeller
Date released
10
May, 2021
8
August, 2017
8
May, 2020
2
August, 2021
2
November, 2017
1
April, 2019
1
May, 2019
Available data
39
tagAlign
32
bigWig
31
bed narrowPeak
12
bam
10
bed broadPeak
2
fastq
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
32
Homo sapiens
Biosample type
19
tissue
10
primary cell
3
cell line
Organ
11
liver
6
musculature of body
2
pancreas
1
adipose tissue
1
brain
1
connective tissue
1
heart
1
limb
Project
32
AMP
Genome assembly (visualization)
409
hg19
GRCh38
Lab
20
AMP-T2D consortium
10
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
Audit category:
1
inconsistent control read length
assembly!
GRCh38
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
tissue
liver
8
skeletal muscle tissue
5
islet of Langerhans
2
cingulate gyrus
1
heart left ventricle
1
+ See 2 more…
primary cell
CD8-positive, alpha-beta T cell
10
cell line
HepG2
3
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