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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
49
ChIP-seq
46
ATAC-seq
9
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
49
DNA binding
Target of assay
34
histone
34
histone modification
23
broad histone mark
11
narrow histone mark
10
control
5
transcription factor
1
RNA binding protein
Date released
May, 2019
40
October, 2019
6
February, 2021
3
November, 2017
Available data
49
bam
37
bigWig
34
bed narrowPeak
30
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
3
fastq
Organism
49
Homo sapiens
Biosample type
23
tissue
20
primary cell
6
cell line
Organ
552
liver
216
pancreas
190
brain
153
connective tissue
124
epithelium
73
adipose tissue
73
heart
60
blood
60
bodily fluid
59
limb
52
vasculature
49
blood vessel
47
kidney
35
nerve
32
musculature of body
29
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
49
AMP
Genome assembly (visualization)
37
hg19
34
GRCh38
Lab
49
AMP-T2D consortium
assembly!
hg18
month_released!
May, 2019
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
tissue
tibial artery
23
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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