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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
total RNA-seq
112
ATAC-seq
Assay category
123
Transcription
112
DNA accessibility
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
90
bam
90
bigWig
76
fastq
57
tsv
Organism
235
Homo sapiens
Biosample type
288
tissue
235
primary cell
16
in vitro differentiated cells
7
cell line
Organ
37
epithelium
37
pancreas
Project
114
AMP
76
HPAP
45
T1D
Genome assembly (visualization)
90
hg19
45
GRCh38
Lab
114
AMP-T2D consortium
76
Klaus Kaestner, Upenn
45
Kyle Gaulton, UCSD
Audit category:
14
inconsistent ontology term
assembly!
hg18
BIOSAMPLE
ASSAY
235 results
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total RNA-seq
ATAC-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
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