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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
WGBS
3
ATAC-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
70
DNA binding
7
DNA methylation
4
DNA accessibility
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
715
February, 2021
399
May, 2021
370
August, 2017
341
May, 2020
336
November, 2017
319
August, 2021
305
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
January, 2018
3
June, 2018
1
August, 2022
Available data
88
fastq
87
bam
83
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
82
Homo sapiens
Biosample type
62
cell line
19
tissue
1
primary cell
Organ
50
liver
16
blood
16
bodily fluid
8
spleen
5
pancreas
1
adipose tissue
1
connective tissue
1
musculature of body
Project
82
AMP
Genome assembly (visualization)
70
GRCh38
65
hg19
hg18
Lab
82
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assembly!
hg18
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
1
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
adipose tissue
1
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primary cell
pancreatic cell
1
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