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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ATAC-seq
43
single cell RNA-seq
41
WGBS
32
snATAC-seq
20
total RNA-seq
Assay category
91
DNA accessibility
63
Transcription
41
DNA methylation
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
24
bam
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
194
Homo sapiens
Biosample type
134
primary cell
61
tissue
Organ
80
epithelium
80
pancreas
40
liver
19
lung
2
musculature of body
Project
134
HPAP
42
AMP
19
LungMap
Genome assembly (visualization)
21
hg19
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
19
Xin Sun, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
assembly!
hg18
files.file_type!
fastq
BIOSAMPLE
ASSAY
195 results
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Clear Filters
ATAC-seq
single cell RNA-seq
WGBS
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
lung
9
10
skeletal muscle tissue
1
1
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