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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
237
ChIP-seq
Assay category
237
DNA binding
Target of assay
237
histone
237
histone modification
134
narrow histone mark
103
broad histone mark
68
control
9
transcription factor
Date released
74
August, 2017
67
November, 2017
40
October, 2019
27
May, 2020
16
August, 2021
12
October, 2017
1
May, 2021
Available data
716
bigWig
700
bam
698
bed narrowPeak
391
bigBed narrowPeak
237
tagAlign
229
fastq
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
231
Homo sapiens
Biosample type
186
tissue
26
in vitro differentiated cells
14
primary cell
11
cell line
Organ
99
brain
58
liver
19
connective tissue
15
pancreas
13
musculature of body
7
adipose tissue
4
epithelium
1
pituitary gland
Project
237
AMP
Genome assembly (visualization)
153
GRCh38
143
hg19
Lab
237
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
assembly!
hg18
BIOSAMPLE
ASSAY
237 results
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Clear Filters
ChIP-seq
tissue
liver
44
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
skeletal muscle tissue
13
+ See 43 more…
in vitro differentiated cells
neural progenitor cell
13
adipocyte
12
pancreatic PP cell
1
primary cell
skeletal muscle myoblast
11
hepatocyte
3
cell line
HepG2
11
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