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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
52
Transcription
14
DNA accessibility
Target of assay
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
213
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
January, 2018
3
June, 2018
1
August, 2022
Available data
51
tsv
41
fastq
40
bam
40
bigWig
14
bed narrowPeak
14
bigBed narrowPeak
1
csv
Organism
66
Homo sapiens
Biosample type
41
primary cell
25
tissue
Organ
41
pancreas
40
epithelium
12
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
66
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
hg18
target.investigated_as!
histone
BIOSAMPLE
ASSAY
66 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
pancreatic cell
1
tissue
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
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