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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
16
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
2
WGBS
1
pCHi-C
Assay category
35
DNA accessibility
16
DNA binding
9
Transcription
2
DNA methylation
Target of assay
16
control
Date released
35
February, 2023
11
May, 2019
6
August, 2021
5
October, 2019
3
February, 2020
2
July, 2019
1
March, 2020
Available data
35
bed narrowPeak
18
bam
10
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
63
Homo sapiens
Biosample type
63
tissue
6
primary cell
2
cell line
Organ
207
kidney
200
heart
122
brain
93
liver
91
pancreas
88
bone element
65
connective tissue
64
adipose tissue
63
blood vessel
63
vasculature
46
artery
26
eye
22
limb
20
lung
17
musculature of body
12
nerve
11
spleen
5
gonad
5
ovary
4
skeleton
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
63
AMP
Genome assembly (visualization)
105
GRCh38
hg19
Lab
63
AMP-T2D consortium
assembly!
hg19
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
63 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
WGBS
pCHi-C
tissue
coronary artery
35
2
1
aorta
2
4
2
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
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