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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
17
WGBS
5
GRO-seq
Assay category
96
DNA binding
DNA accessibility
17
DNA methylation
Target of assay
87
histone
87
histone modification
56
broad histone mark
31
narrow histone mark
9
transcription factor
6
RNA binding protein
3
recombinant protein
Date released
53
November, 2017
40
May, 2024
9
November, 2018
8
July, 2019
5
January, 2018
2
August, 2017
1
August, 2021
Available data
367
bam
311
fastq
186
tsv
159
tagAlign
157
txt
118
bigWig
97
bed narrowPeak
93
zippedFastqFolder
56
bigBed narrowPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
118
Homo sapiens
Biosample type
107
tissue
5
cell line
5
in vitro differentiated cells
1
stem cell
Organ
51
brain
46
heart
5
liver
4
pancreas
2
adipose tissue
2
connective tissue
2
spleen
1
blood vessel
1
embryo
1
limb
1
musculature of body
1
vasculature
Project
118
AMP
Genome assembly (visualization)
2409
GRCh38
hg19
5
hg18
Lab
78
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
assembly!
hg19
assay_slims!
DNA accessibility
month_released!
May, 2021
BIOSAMPLE
ASSAY
118 results
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ChIP-seq
WGBS
GRO-seq
tissue
left cardiac atrium
40
layer of hippocampus
16
caudate nucleus
11
substantia nigra
10
middle frontal area 46
9
+ See 12 more…
cell line
HepG2
4
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
neural progenitor cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
See all biosamples
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