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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
94
Transcription
DNA accessibility
Date released
189
August, 2021
134
August, 2017
125
November, 2017
114
February, 2021
101
May, 2022
100
February, 2023
82
October, 2019
67
May, 2021
56
September, 2020
47
September, 2023
32
March, 2020
29
October, 2018
26
May, 2020
25
February, 2020
23
May, 2019
17
December, 2017
17
November, 2018
16
July, 2019
15
April, 2019
10
November, 2020
9
April, 2020
9
October, 2017
8
February, 2018
8
June, 2019
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
3
May, 2023
2
November, 2019
1
August, 2018
1
October, 2022
1
September, 2018
Available data
76
fastq
4
tsv
4
txt
Organism
99
Homo sapiens
Biosample type
76
primary cell
14
tissue
6
cell line
4
in vitro differentiated cells
Organ
43
pancreas
40
epithelium
4
bone element
4
connective tissue
4
eye
4
skeleton
1
heart
Project
76
HPAP
14
AMP
10
T1D
Lab
76
Klaus Kaestner, Upenn
14
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assembly!
hg19
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
100 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
cell line
EndoC_BH1
3
2
1
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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