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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
34
single cell RNA-seq
26
total RNA-seq
snATAC-seq
Assay category
60
Transcription
41
DNA methylation
39
DNA accessibility
Date released
239
August, 2021
158
February, 2023
140
May, 2022
111
February, 2021
59
September, 2020
58
May, 2020
47
September, 2023
41
May, 2021
33
October, 2019
32
March, 2020
25
February, 2020
23
June, 2019
17
July, 2019
14
May, 2023
12
August, 2017
10
November, 2020
9
April, 2020
8
November, 2018
7
August, 2020
5
December, 2019
5
January, 2018
5
March, 2023
4
July, 2018
2
March, 2019
1
August, 2018
1
December, 2018
1
October, 2017
1
October, 2022
1
September, 2018
Available data
113
zippedFastqFolder
6
bam
6
fastq
6
txt
Organism
140
Homo sapiens
Biosample type
113
primary cell
27
tissue
Organ
86
pancreas
80
epithelium
20
liver
1
musculature of body
Project
113
HPAP
27
AMP
Genome assembly (visualization)
hg19
Lab
113
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
1
AMP-T2D consortium
assembly!
hg19
assay_slims!
DNA binding
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
140 results
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WGBS
ATAC-seq
single cell RNA-seq
total RNA-seq
primary cell
pancreatic alpha cell
25
22
Langerhans cell
33
pancreatic beta cell
16
13
pancreatic acinar cell
4
tissue
liver
20
islet of Langerhans
6
skeletal muscle tissue
1
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