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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
GRO-seq
3
pCHi-C
2
single cell RNA-seq
Assay category
DNA binding
7
Transcription
Date released
5
May, 2021
February, 2023
4
January, 2018
2
December, 2019
2
March, 2020
1
August, 2018
Available data
5
fastq
4
bigWig
4
tsv
1
bedpe bed3+
Organism
14
Homo sapiens
Biosample type
582
tissue
340
primary cell
49
cell line
14
in vitro differentiated cells
7
stem cell
Organ
1
adipose tissue
1
connective tissue
1
embryo
Project
14
AMP
Genome assembly (visualization)
hg19
145
GRCh38
4
hg18
Lab
9
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
2
audit script error
assembly!
hg19
assay_slims!
DNA binding
month_released!
February, 2023
BIOSAMPLE
ASSAY
14 results
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total RNA-seq
GRO-seq
pCHi-C
single cell RNA-seq
in vitro differentiated cells
embryonic stem cell
5
1
cardiomyocytes (cardiac muscle cell)
1
2
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
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