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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
5
STARR-seq
4
ChIP-seq
1
Hi-C
Assay category
10
Transcription
4
DNA binding
1
3D chromatin structure
DNA sequencing
Target of assay
4
control
Date released
20
August, 2021
Available data
10
tsv
1
bedpe bed3+
Organism
20
Homo sapiens
Biosample type
18
cell line
2
tissue
Organ
15
liver
2
kidney
2
pancreas
Project
20
AMP
Genome assembly (visualization)
hg19
1
GRCh38
Lab
987
AMP-T2D consortium
321
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
105
Kyle Gaulton, UCSD
47
KPMP
20
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
1
inconsistent ontology term
assembly!
hg19
assay_slims!
DNA sequencing
BIOSAMPLE
ASSAY
20 results
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total RNA-seq
STARR-seq
ChIP-seq
Hi-C
cell line
HepG2
9
2
4
HEK293T
2
Synthesized DNA
1
tissue
islet of Langerhans
1
1
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