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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
35
ATAC-seq
20
ChIP-seq
WGBS
3
DNase-seq
3
pCHi-C
3
total RNA-seq
Assay category
96
Transcription
38
DNA accessibility
20
DNA binding
Target of assay
20
control
Date released
92
August, 2021
36
February, 2023
10
April, 2019
6
May, 2019
5
June, 2019
3
February, 2020
3
March, 2020
2
February, 2021
Available data
98
tsv
38
bed narrowPeak
23
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
2
tagAlign
Organism
157
Homo sapiens
Biosample type
152
tissue
3
primary cell
2
cell line
Organ
237
pancreas
225
kidney
166
epithelium
161
liver
157
heart
122
brain
89
bone element
89
connective tissue
69
blood vessel
69
vasculature
59
adipose tissue
48
artery
27
eye
25
limb
22
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
157
AMP
Genome assembly (visualization)
220
GRCh38
hg19
Lab
157
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
hg19
assay_title!
WGBS
BIOSAMPLE
ASSAY
157 results
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single cell RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
total RNA-seq
tissue
coronary artery
35
2
1
heart left ventricle
18
6
1
heart right ventricle
17
2
1
right cardiac atrium
18
1
1
left cardiac atrium
18
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primary cell
cardiac fibroblast
2
1
cell line
smooth muscle cell of the coronary artery
2
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