Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ATAC-seq
73
total RNA-seq
55
ChIP-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
2
Capture-C
2
DNase-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
Hi-C
1
pCHi-C
Assay category
55
DNA binding
Target of assay
46
control
9
histone
9
histone modification
5
broad histone mark
4
narrow histone mark
Date released
29
August, 2017
11
October, 2018
7
October, 2019
4
September, 2017
2
November, 2019
1
May, 2019
1
May, 2021
Available data
41
bam
28
fastq
5
tagAlign
Organism
54
Homo sapiens
Biosample type
33
tissue
12
primary cell
9
cell line
1
in vitro differentiated cells
Organ
123
liver
95
brain
77
connective tissue
60
heart
55
pancreas
54
adipose tissue
28
epithelium
23
blood vessel
23
vasculature
18
limb
13
kidney
12
musculature of body
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
5
vein
4
gonad
4
ovary
3
eye
1
lymph node
Project
55
AMP
Genome assembly (visualization)
hg19
157
GRCh38
Lab
55
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assembly!
hg19
BIOSAMPLE
ASSAY
55 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
islet of Langerhans
19
body of pancreas
9
pancreas
3
endocrine pancreas
2
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cell line
Panc1
7
EndoC_BH1
2
in vitro differentiated cells
pancreatic PP cell
1
Download