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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
4
Hi-C
2
RRBS
2
total RNA-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
Assay category
10
DNA binding
4
3D chromatin structure
3
DNA methylation
3
Transcription
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
2
narrow histone mark
Date released
11
August, 2017
5
July, 2019
2
February, 2020
June, 2019
1
March, 2020
1
May, 2019
1
May, 2022
Available data
3
tsv
2
bam
2
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
21
Homo sapiens
Biosample type
21
tissue
Organ
286
pancreas
217
kidney
205
epithelium
200
heart
166
liver
112
brain
91
connective tissue
89
bone element
70
blood vessel
70
vasculature
65
adipose tissue
48
artery
26
eye
26
limb
21
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
hg19
12
GRCh38
Lab
21
AMP-T2D consortium
assembly!
hg19
month_released!
June, 2019
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
Hi-C
RRBS
total RNA-seq
WGBS
pCHi-C
single cell RNA-seq
tissue
skeletal muscle tissue
9
2
1
gastrocnemius medialis
4
1
muscle of leg
1
1
left ventricle myocardium
1
psoas muscle
1
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