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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
1
Hi-C
1
WGBS
1
pCHi-C
Assay category
52
DNA binding
1
3D chromatin structure
1
DNA methylation
Target of assay
43
control
9
transcription factor
4
recombinant protein
3
RNA binding protein
Date released
49
November, 2017
4
November, 2018
1
December, 2018
1
May, 2020
Available data
54
fastq
52
bam
5
bigWig
4
bed narrowPeak
4
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
55
Homo sapiens
Biosample type
73
tissue
55
cell line
1
in vitro differentiated cells
1
primary cell
Organ
55
liver
28
pancreas
21
epithelium
6
blood
6
bodily fluid
5
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
1
mammary gland
Project
55
AMP
Genome assembly (visualization)
hg19
268
GRCh38
Lab
55
AMP-T2D consortium
16
Bing Ren, UCSD
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
Hi-C
WGBS
pCHi-C
cell line
HepG2
52
1
1
1
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