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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
338
ChIP-seq
174
single cell RNA-seq
138
ATAC-seq
135
total RNA-seq
87
RNA microarray
27
WGBS
27
snATAC-seq
25
pCHi-C
17
DNase-seq
5
Hi-C
4
MeRIP-seq
3
snDrop-seq
2
RRBS
Assay category
138
DNA accessibility
Date released
64
August, 2021
46
February, 2023
13
October, 2019
11
May, 2023
2
March, 2019
1
July, 2019
1
October, 2017
Available data
99
bed narrowPeak
64
xls
3
bam
2
bigWig
2
fastq
1
bed broadPeak
Organism
138
Homo sapiens
Biosample type
138
tissue
116
primary cell
16
cell line
Organ
75
kidney
35
artery
35
blood vessel
35
heart
35
vasculature
16
pancreas
3
brain
1
eye
1
pituitary gland
1
skin of body
Project
127
AMP
11
T1D
Genome assembly (visualization)
158
GRCh38
hg19
Lab
75
Katalin Susztak, Upenn
50
AMP-T2D consortium
11
Kyle Gaulton, UCSD
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
assembly!
hg19
BIOSAMPLE
ASSAY
138 results
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ATAC-seq
tissue
kidney
75
coronary artery
35
islet of Langerhans
26
cerebellum (Hemisphere)
1
posterior cingulate cortex
1
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