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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
6
WGBS
2
total RNA-seq
1
RNA microarray
1
pCHi-C
Assay category
55
DNA binding
6
DNA methylation
2
Transcription
Target of assay
31
histone
31
histone modification
24
control
20
broad histone mark
11
narrow histone mark
Date released
42
August, 2017
18
October, 2018
2
February, 2020
1
August, 2021
1
March, 2020
1
October, 2019
Available data
22
fastq
21
bam
7
tagAlign
3
tsv
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
Organism
64
Homo sapiens
Biosample type
65
tissue
24
in vitro differentiated cells
5
primary cell
1
stem cell
Organ
207
kidney
160
heart
122
brain
93
liver
92
pancreas
88
bone element
65
connective tissue
64
adipose tissue
63
blood vessel
63
vasculature
46
artery
26
eye
26
limb
21
musculature of body
20
lung
12
nerve
11
spleen
5
gonad
5
ovary
4
skeleton
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
65
AMP
Genome assembly (visualization)
hg19
480
GRCh38
Lab
65
AMP-T2D consortium
assembly!
hg19
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
WGBS
total RNA-seq
RNA microarray
pCHi-C
tissue
subcutaneous abdominal adipose tissue
35
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
3
1
islet of Langerhans
1
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