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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
ChIP-seq
Assay category
159
DNA binding
Target of assay
94
histone
94
histone modification
65
control
62
broad histone mark
32
narrow histone mark
Date released
60
November, 2017
47
August, 2017
23
May, 2020
9
October, 2019
8
August, 2021
8
October, 2017
3
February, 2021
1
May, 2021
Available data
359
bam
212
bed narrowPeak
180
tsv
167
fastq
159
tagAlign
157
txt
136
bigWig
72
bigBed narrowPeak
64
xls
17
bed bedMethyl
17
bed broadPeak
17
bigBed bedMethyl
bed bed3+
16
bigBed broadPeak
6
csv
2
bedpe bed3+
1
vcf
Organism
158
Homo sapiens
Biosample type
133
tissue
23
in vitro differentiated cells
3
cell line
primary cell
Organ
75
brain
43
liver
21
connective tissue
7
adipose tissue
5
pancreas
2
artery
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
epithelium
Project
159
AMP
Genome assembly (visualization)
148
GRCh38
hg19
Lab
159
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
hg19
files.file_type!
bed bed3+
biosample_type!
primary cell
BIOSAMPLE
ASSAY
159 results
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ChIP-seq
tissue
liver
43
caudate nucleus
14
layer of hippocampus
14
substantia nigra
14
cingulate gyrus
12
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in vitro differentiated cells
adipocyte
14
neural progenitor cell
8
pancreatic PP cell
1
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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