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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
64
ATAC-seq
Assay category
97
DNA binding
64
DNA accessibility
Target of assay
88
histone
88
histone modification
57
broad histone mark
31
narrow histone mark
9
transcription factor
6
RNA binding protein
3
recombinant protein
Date released
65
August, 2021
54
November, 2017
40
May, 2024
February, 2023
2
November, 2018
Available data
394
bam
274
fastq
184
bed narrowPeak
182
tsv
160
tagAlign
153
bigWig
153
txt
153
zippedFastqFolder
79
bigBed narrowPeak
64
xls
24
bed broadPeak
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
161
Homo sapiens
Biosample type
156
tissue
4
cell line
1
in vitro differentiated cells
Organ
64
kidney
52
brain
40
heart
4
liver
Project
161
AMP
Genome assembly (visualization)
1362
GRCh38
hg19
Lab
64
Katalin Susztak, Upenn
57
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
assembly!
hg19
files.file_type!
bed bed3+
month_released!
February, 2023
BIOSAMPLE
ASSAY
161 results
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ChIP-seq
ATAC-seq
tissue
kidney
64
left cardiac atrium
40
layer of hippocampus
16
caudate nucleus
11
substantia nigra
10
+ See 3 more…
cell line
HepG2
4
in vitro differentiated cells
neural progenitor cell
1
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