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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
2
WGBS
1
pCHi-C
Assay category
23
DNA binding
9
Transcription
2
DNA methylation
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
11
May, 2019
10
October, 2019
6
August, 2021
3
February, 2020
2
February, 2021
2
July, 2019
1
March, 2020
Available data
bed narrowPeak
26
bam
10
tsv
2
bigWig
2
tagAlign
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
35
Homo sapiens
Biosample type
28
tissue
5
primary cell
2
cell line
Organ
286
pancreas
207
epithelium
162
liver
154
kidney
127
heart
94
connective tissue
89
bone element
65
adipose tissue
60
brain
35
blood vessel
35
vasculature
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
13
artery
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
hg19
59
GRCh38
Lab
35
AMP-T2D consortium
assembly!
hg19
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
WGBS
pCHi-C
tissue
aorta
2
4
2
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
coronary artery
2
1
+ See 1 more…
primary cell
endothelial cell of umbilical vein
5
cell line
smooth muscle cell of the coronary artery
2
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