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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
23
DNase-seq
Assay category
52
DNA binding
23
DNA accessibility
Target of assay
52
histone
52
histone modification
36
broad histone mark
16
narrow histone mark
Date released
52
November, 2017
23
June, 2019
Available data
394
bam
fastq
198
tsv
179
bed narrowPeak
160
tagAlign
157
txt
153
zippedFastqFolder
113
bigWig
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
75
Homo sapiens
Biosample type
68
tissue
7
primary cell
Organ
62
brain
7
kidney
6
epithelium
3
heart
2
pancreas
1
blood vessel
1
connective tissue
1
vasculature
Project
75
AMP
Genome assembly (visualization)
508
GRCh38
hg19
Lab
75
AMP-T2D consortium
assembly!
hg19
files.file_type!
fastq
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
DNase-seq
tissue
layer of hippocampus
16
caudate nucleus
11
1
substantia nigra
10
middle frontal area 46
9
cingulate gyrus
5
+ See 14 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
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