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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ATAC-seq
57
ChIP-seq
Assay category
99
DNA accessibility
57
DNA binding
Target of assay
53
histone
53
histone modification
37
broad histone mark
16
narrow histone mark
4
transcription factor
3
recombinant protein
1
RNA binding protein
Date released
65
August, 2021
54
November, 2017
35
February, 2023
June, 2019
2
November, 2018
Available data
363
bam
350
fastq
198
tsv
160
tagAlign
157
txt
156
bed narrowPeak
153
zippedFastqFolder
90
bigWig
64
xls
56
bigBed narrowPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
bed broadPeak
1
hic
1
vcf
Organism
156
Homo sapiens
Biosample type
151
tissue
4
cell line
1
in vitro differentiated cells
Organ
64
kidney
52
brain
35
artery
35
blood vessel
35
heart
35
vasculature
4
liver
Project
156
AMP
Genome assembly (visualization)
hg19
1382
GRCh38
Lab
92
AMP-T2D consortium
64
Katalin Susztak, Upenn
assembly!
hg19
month_released!
June, 2019
BIOSAMPLE
ASSAY
156 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
coronary artery
35
layer of hippocampus
16
caudate nucleus
11
substantia nigra
10
+ See 3 more…
cell line
HepG2
4
in vitro differentiated cells
neural progenitor cell
1
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