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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
WGBS
52
single cell RNA-seq
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
58
DNA methylation
52
Transcription
Date released
134
May, 2022
19
September, 2020
8
July, 2019
7
November, 2018
2
August, 2017
Available data
394
bam
350
fastq
198
tsv
179
bed narrowPeak
160
tagAlign
157
txt
153
zippedFastqFolder
113
bigWig
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
170
Homo sapiens
Biosample type
153
primary cell
16
tissue
1
cell line
Organ
84
pancreas
80
epithelium
6
heart
2
adipose tissue
2
connective tissue
2
spleen
1
blood vessel
1
limb
1
liver
1
musculature of body
1
vasculature
Project
153
HPAP
17
AMP
Genome assembly (visualization)
hg19
17
GRCh38
Lab
153
Klaus Kaestner, Upenn
17
AMP-T2D consortium
assembly!
hg19
BIOSAMPLE
ASSAY
170 results
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WGBS
single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
tissue
adipose tissue
2
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
pancreas
2
+ See 5 more…
cell line
HepG2
1
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