Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
7
WGBS
1
ATAC-seq
1
single cell RNA-seq
Assay category
18
DNA binding
7
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
9
control
6
histone
6
histone modification
5
broad histone mark
3
recombinant protein
3
transcription factor
1
narrow histone mark
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
21
fastq
19
bam
10
bigWig
8
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
2
bed narrowPeak
2
bigBed narrowPeak
1
csv
Organism
27
Homo sapiens
Biosample type
19
tissue
7
cell line
1
primary cell
Organ
10
brain
5
spleen
4
liver
4
pancreas
3
blood
3
bodily fluid
Project
27
AMP
Genome assembly (visualization)
93
GRCh38
hg19
Lab
27
AMP-T2D consortium
Audit category:
2
missing controlled_by
assembly!
hg19
month_released!
April, 2020
BIOSAMPLE
ASSAY
27 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
brain
9
spleen
3
2
body of pancreas
2
pancreas
2
cerebellum (Hemisphere)
1
cell line
HepG2
3
1
GM12878
3
primary cell
pancreatic cell
1
Download