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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
21
total RNA-seq
4
WGBS
1
DNase-seq
1
single cell RNA-seq
Assay category
67
DNA binding
22
Transcription
4
DNA methylation
1
DNA accessibility
Target of assay
47
control
20
histone
20
histone modification
12
broad histone mark
8
narrow histone mark
Date released
34
August, 2017
23
May, 2020
20
May, 2022
13
December, 2017
1
August, 2021
1
February, 2020
1
February, 2021
1
July, 2019
March, 2020
Available data
44
bam
44
tagAlign
21
fastq
1
csv
1
tsv
Organism
94
Homo sapiens
Biosample type
92
tissue
cell line
1
in vitro differentiated cells
1
primary cell
Organ
251
pancreas
218
kidney
200
heart
186
epithelium
120
brain
94
liver
93
connective tissue
89
bone element
68
blood vessel
68
vasculature
64
adipose tissue
46
artery
27
eye
26
limb
22
musculature of body
19
lung
12
nerve
10
spleen
8
blood
8
bodily fluid
8
embryo
5
vein
4
gonad
4
ovary
4
skeleton
1
bone marrow
1
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
94
AMP
Genome assembly (visualization)
hg19
262
GRCh38
Lab
74
AMP-T2D consortium
20
Karen Mohlke, UNC
assembly!
hg19
month_released!
March, 2020
biosample_type!
cell line
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
total RNA-seq
WGBS
DNase-seq
single cell RNA-seq
tissue
liver
62
20
3
1
right lobe of liver
3
1
1
1
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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