Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
23
DNase-seq
Assay category
54
DNA binding
23
DNA accessibility
Target of assay
52
histone
52
histone modification
36
broad histone mark
16
narrow histone mark
2
transcription factor
1
RNA binding protein
1
recombinant protein
Date released
54
November, 2017
23
June, 2019
November, 2018
Available data
378
bam
333
fastq
198
tsv
177
bed narrowPeak
160
tagAlign
157
txt
153
zippedFastqFolder
104
bigWig
77
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
10
bed bedMethyl
10
bigBed bedMethyl
7
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
77
Homo sapiens
Biosample type
68
tissue
7
primary cell
2
cell line
Organ
62
brain
7
kidney
6
epithelium
3
heart
2
liver
2
pancreas
1
blood vessel
1
connective tissue
1
vasculature
Project
77
AMP
Genome assembly (visualization)
926
GRCh38
hg19
Lab
77
AMP-T2D consortium
assembly!
hg19
month_released!
November, 2018
BIOSAMPLE
ASSAY
77 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
tissue
layer of hippocampus
16
caudate nucleus
11
1
substantia nigra
10
middle frontal area 46
9
cingulate gyrus
5
+ See 14 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
cell line
HepG2
2
See all biosamples
Download