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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
4
Hi-C
3
total RNA-seq
1
WGBS
1
pCHi-C
Assay category
22
DNA binding
4
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
17
control
5
histone
5
histone modification
5
narrow histone mark
Date released
21
October, 2019
5
July, 2019
3
February, 2020
1
March, 2020
1
May, 2019
Available data
18
bam
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
31
Homo sapiens
Biosample type
31
tissue
Organ
284
pancreas
225
kidney
213
epithelium
205
heart
166
liver
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
31
AMP
Genome assembly (visualization)
96
GRCh38
hg19
Lab
31
AMP-T2D consortium
assembly!
hg19
month_released!
September, 2017
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
Hi-C
total RNA-seq
WGBS
pCHi-C
tissue
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
4
1
islet of Langerhans
5
muscle of leg
1
1
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