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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
14
total RNA-seq
13
ATAC-seq
4
pCHi-C
Assay category
58
DNA binding
14
Transcription
13
DNA accessibility
Target of assay
36
control
22
histone
22
histone modification
21
narrow histone mark
1
broad histone mark
Date released
258
August, 2021
125
November, 2017
123
August, 2017
96
February, 2021
89
October, 2019
72
February, 2023
61
May, 2021
47
September, 2023
32
March, 2020
29
October, 2018
27
May, 2022
25
February, 2020
24
May, 2020
22
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
16
June, 2019
16
November, 2018
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
8
January, 2021
5
December, 2018
5
December, 2019
5
January, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
37
bam
9
tagAlign
Organism
89
Homo sapiens
Biosample type
79
tissue
10
cell line
primary cell
Organ
21
eye
17
limb
11
nerve
10
pancreas
8
brain
5
artery
5
blood vessel
5
kidney
5
vasculature
4
gonad
4
ovary
1
connective tissue
1
lymph node
1
pituitary gland
1
skin of body
Project
89
AMP
Genome assembly (visualization)
hg19
185
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assembly!
hg19
biosample_type!
primary cell
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
11
tibial artery
5
kidney
2
central medial thalamic nucleus
1
+ See 8 more…
cell line
Panc1
7
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
See all biosamples
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