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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
total RNA-seq
21
ChIP-seq
4
Hi-C
4
pCHi-C
1
ATAC-seq
1
WGBS
Assay category
22
Transcription
21
DNA binding
4
3D chromatin structure
1
DNA accessibility
1
DNA methylation
Target of assay
18
control
3
histone
3
histone modification
3
narrow histone mark
Date released
38
October, 2019
5
July, 2019
4
February, 2020
4
February, 2023
1
June, 2019
1
May, 2019
Available data
19
bam
8
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
53
Homo sapiens
Biosample type
52
tissue
1
primary cell
Organ
288
pancreas
225
kidney
213
epithelium
205
heart
166
liver
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
hg19
102
GRCh38
Lab
53
AMP-T2D consortium
assembly!
hg19
organ_slims!
embryo
BIOSAMPLE
ASSAY
53 results
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total RNA-seq
ChIP-seq
Hi-C
pCHi-C
ATAC-seq
WGBS
tissue
islet of Langerhans
14
3
4
1
tibial nerve
1
11
tibial artery
1
5
gastrocnemius medialis
1
4
retina
3
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primary cell
retinal pigment epithelial cell
1
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