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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
2
WGBS
1
pCHi-C
Assay category
23
DNA binding
9
Transcription
2
DNA methylation
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
February, 2023
11
May, 2019
10
October, 2019
6
August, 2021
3
February, 2020
2
February, 2021
2
July, 2019
1
March, 2020
Available data
25
bam
10
tsv
2
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
35
Homo sapiens
Biosample type
28
tissue
5
primary cell
2
cell line
Organ
232
pancreas
kidney
173
epithelium
169
heart
166
liver
122
brain
91
connective tissue
85
bone element
65
adipose tissue
36
blood vessel
36
vasculature
26
limb
23
eye
23
musculature of body
20
lung
14
blood
14
bodily fluid
13
artery
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
hg19
155
GRCh38
Lab
35
AMP-T2D consortium
assembly!
hg19
organ_slims!
kidney
month_released!
February, 2023
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
WGBS
pCHi-C
tissue
aorta
2
4
2
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
coronary artery
2
1
+ See 1 more…
primary cell
endothelial cell of umbilical vein
5
cell line
smooth muscle cell of the coronary artery
2
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