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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
3
ChIP-seq
3
snDrop-seq
Assay category
27
DNA accessibility
18
Transcription
3
DNA binding
Target of assay
3
control
Date released
255
August, 2021
135
February, 2021
125
November, 2017
106
August, 2017
104
February, 2023
87
October, 2019
81
May, 2020
75
May, 2022
65
May, 2021
47
September, 2023
40
September, 2020
29
June, 2019
29
March, 2020
24
February, 2020
22
May, 2019
19
April, 2020
18
October, 2018
17
December, 2017
17
July, 2019
15
April, 2019
14
May, 2023
13
November, 2018
10
October, 2017
8
February, 2018
8
January, 2021
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
1
August, 2018
1
October, 2022
1
September, 2018
Available data
89
txt
39
fastq
8
tsv
6
csv
3
bam
3
tagAlign
Organism
135
Homo sapiens
Biosample type
93
tissue
39
primary cell
3
cell line
Organ
84
bone element
8
kidney
6
epithelium
pancreas
2
artery
2
blood vessel
2
heart
2
vasculature
1
liver
Project
96
AMP
39
HPAP
Genome assembly (visualization)
hg19
542
GRCh38
Lab
96
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
assembly!
hg19
organ_slims!
pancreas
BIOSAMPLE
ASSAY
135 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
ChIP-seq
snDrop-seq
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
primary cell
Langerhans cell
27
12
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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