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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
17
pCHi-C
16
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
18
DNA binding
16
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
257
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
81
May, 2020
72
October, 2019
61
November, 2017
59
August, 2017
59
May, 2021
59
September, 2020
47
September, 2023
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
July, 2019
17
November, 2018
16
December, 2017
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2017
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
1
bam
1
tagAlign
Organism
59
Homo sapiens
Biosample type
23
in vitro differentiated cells
18
primary cell
16
cell line
2
tissue
Organ
18
pancreas
17
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
42
AMP
17
T1D
Genome assembly (visualization)
hg19
190
GRCh38
Lab
40
Kyle Gaulton, UCSD
19
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assembly!
hg19
target.investigated_as!
histone
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
17
5
pancreatic PP cell
1
primary cell
monocyte
1
1
1
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
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cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
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