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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
DNase-seq
17
WGBS
1
ATAC-seq
Assay category
24
DNA accessibility
17
DNA methylation
Date released
23
June, 2019
8
July, 2019
7
November, 2018
2
August, 2017
1
March, 2019
Available data
390
bam
346
fastq
216
bed narrowPeak
198
tsv
160
tagAlign
157
txt
153
zippedFastqFolder
150
bigWig
76
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
41
Homo sapiens
Biosample type
33
tissue
7
primary cell
1
cell line
Organ
10
brain
9
heart
7
kidney
7
pancreas
6
epithelium
3
connective tissue
2
adipose tissue
2
blood vessel
2
spleen
2
vasculature
1
limb
1
liver
1
musculature of body
Project
41
AMP
Genome assembly (visualization)
hg19
299
GRCh38
Lab
40
AMP-T2D consortium
1
Mark McCarthy, Oxford
assembly!
hg19
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
41 results
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DNase-seq
WGBS
ATAC-seq
tissue
body of pancreas
2
2
heart
2
1
adipose tissue
2
heart left ventricle
2
heart right ventricle
2
+ See 18 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
cell line
HepG2
1
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