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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
5
MeRIP-seq
Assay category
22
DNA binding
Target of assay
311
control
198
histone
198
histone modification
110
broad histone mark
88
narrow histone mark
22
transcription factor
9
RNA binding protein
5
nucleotide modification
4
recombinant protein
Date released
12
May, 2021
6
November, 2017
5
November, 2020
3
November, 2018
1
April, 2019
Available data
9
bam
9
fastq
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
Organism
27
Homo sapiens
Biosample type
12
cell line
12
in vitro differentiated cells
3
tissue
Organ
9
liver
5
pancreas
3
epithelium
1
kidney
Project
27
AMP
Genome assembly (visualization)
hg19
443
GRCh38
Lab
12
Kyle Gaulton, UCSD
10
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
MeRIP-seq
cell line
HepG2
9
EndoC_BH1
3
in vitro differentiated cells
embryonic stem cell
12
tissue
islet of Langerhans
2
kidney
1
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