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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
1
Hi-C
Assay category
204
DNA accessibility
DNA binding
1
3D chromatin structure
Date released
187
June, 2019
9
November, 2018
8
October, 2019
1
November, 2020
Available data
1735
bam
1676
bigWig
1400
tsv
415
bed narrowPeak
299
fastq
231
bigBed narrowPeak
206
bed broadPeak
205
bed bed3+
205
bigBed broadPeak
64
xls
17
bed bedMethyl
17
bigBed bedMethyl
bed bed3
1
hdf5
1
hic
Organism
205
Homo sapiens
Biosample type
176
tissue
27
primary cell
2
cell line
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
8
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
205
AMP
Genome assembly (visualization)
205
GRCh38
197
hg19
Lab
205
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
assay_slims!
DNA binding
files.file_type!
bed bed3
BIOSAMPLE
ASSAY
205 results
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Clear Filters
DNase-seq
Hi-C
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
1
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