Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
1
Hi-C
Assay category
DNA binding
11
DNA accessibility
1
3D chromatin structure
Date released
7
August, 2020
3
September, 2020
1
October, 2017
1
October, 2019
Available data
bam
1676
bigWig
1400
tsv
415
bed narrowPeak
299
fastq
231
bigBed narrowPeak
206
bed broadPeak
205
bed bed3+
205
bigBed broadPeak
64
xls
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
Organism
12
Homo sapiens
Biosample type
10
primary cell
1
cell line
1
tissue
Organ
12
pancreas
10
epithelium
Project
10
HPAP
2
AMP
Genome assembly (visualization)
48
hg19
12
GRCh38
5
hg18
Lab
10
Klaus Kaestner, Upenn
1
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent assembly
assay_slims!
DNA binding
files.file_type!
bam
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
cell line
Panc1
1
tissue
islet of Langerhans
1
Download