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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
DNase-seq
24
ATAC-seq
Assay category
DNA binding
222
DNA accessibility
Date released
187
June, 2019
14
September, 2018
November, 2018
8
October, 2019
7
August, 2017
5
September, 2017
1
November, 2020
Available data
1719
bam
1660
bigWig
1400
tsv
406
bed narrowPeak
283
fastq
222
bigBed narrowPeak
197
bed broadPeak
196
bed bed3+
196
bigBed broadPeak
64
xls
10
bed bedMethyl
10
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
Organism
222
Homo sapiens
Biosample type
170
tissue
49
primary cell
2
cell line
1
in vitro differentiated cells
Organ
79
kidney
39
epithelium
36
limb
33
musculature of body
30
brain
30
heart
28
pancreas
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
4
artery
4
eye
3
liver
2
adipose tissue
2
nerve
2
vein
Project
222
AMP
Genome assembly (visualization)
222
GRCh38
208
hg19
Lab
222
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
DNA binding
month_released!
November, 2018
BIOSAMPLE
ASSAY
222 results
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DNase-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 39 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 21 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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