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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
total RNA-seq
2
ATAC-seq
1
DNase-seq
1
single cell RNA-seq
Assay category
35
Transcription
DNA binding
3
DNA accessibility
Date released
26
February, 2021
5
May, 2021
2
March, 2020
2
November, 2019
1
July, 2018
1
June, 2019
1
October, 2019
Available data
38
bam
36
bigWig
35
tsv
3
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
fastq
Organism
38
Homo sapiens
Biosample type
34
cell line
3
primary cell
1
in vitro differentiated cells
Organ
39
pancreas
38
epithelium
4
kidney
2
connective tissue
2
embryo
1
adipose tissue
1
heart
1
limb
1
liver
1
musculature of body
1
vasculature
Project
36
AMP
2
T1D
Genome assembly (visualization)
42
hg19
38
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
38
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
38 results
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total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
cell line
EndoC_BH1
33
1
primary cell
Liver fetal (hepatocyte)
1
epithelial cell of proximal tubule
1
pancreatic acinar cell
1
in vitro differentiated cells
intermediate endothelial cell
1
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