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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
total RNA-seq
47
ATAC-seq
30
DNase-seq
6
WGBS
1
small RNA-seq
Assay category
DNA binding
77
DNA accessibility
70
Transcription
6
DNA methylation
Date released
60
February, 2021
35
February, 2023
30
June, 2019
21
July, 2019
3
May, 2021
2
March, 2020
2
October, 2019
Available data
118
bam
110
bigWig
77
bed narrowPeak
70
tsv
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
30
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
153
Homo sapiens
Biosample type
85
tissue
60
cell line
7
primary cell
1
in vitro differentiated cells
Organ
491
connective tissue
478
pancreas
406
adipose tissue
197
epithelium
171
liver
166
kidney
153
heart
116
vasculature
114
blood vessel
103
artery
66
bone element
49
limb
46
brain
40
musculature of body
18
ureter
14
embryo
8
skeleton
7
nerve
4
eye
4
spleen
2
vein
1
pericardium
Project
153
AMP
Genome assembly (visualization)
153
GRCh38
114
hg19
Lab
153
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
153 results
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total RNA-seq
ATAC-seq
DNase-seq
WGBS
small RNA-seq
tissue
coronary artery
36
2
heart
4
18
1
1
heart left ventricle
3
2
3
2
right atrium auricular region
2
1
2
heart right ventricle
1
1
2
+ See 4 more…
cell line
smooth muscle cell of the coronary artery
52
8
primary cell
cardiac fibroblast
3
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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