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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
36
DNase-seq
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
47
DNA binding
36
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
50
October, 2019
32
June, 2019
5
May, 2019
1
July, 2019
Available data
88
bam
88
bigWig
83
bed narrowPeak
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
88
Homo sapiens
Biosample type
88
tissue
Organ
576
pancreas
561
connective tissue
528
liver
421
adipose tissue
260
epithelium
215
brain
179
heart
145
vasculature
141
blood vessel
130
kidney
88
limb
83
artery
58
bone element
54
blood
54
bodily fluid
53
musculature of body
30
nerve
29
embryo
18
ureter
15
spleen
12
vein
6
eye
1
pericardium
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
88
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
DNase-seq
total RNA-seq
WGBS
tissue
tibial nerve
24
2
4
tibial artery
18
2
muscle of leg
5
13
1
muscle of arm
17
forelimb muscle
1
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