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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
151
ChIP-seq
89
total RNA-seq
5
ATAC-seq
2
DNase-seq
2
WGBS
Assay category
151
DNA binding
Target of assay
103
histone modification
102
histone
52
narrow histone mark
49
broad histone mark
46
transcription factor
7
RNA binding protein
3
chromatin remodeller
2
control
Date released
280
November, 2017
176
October, 2019
151
August, 2017
96
May, 2019
90
May, 2021
77
December, 2017
64
April, 2019
63
November, 2018
45
October, 2018
32
September, 2018
30
December, 2018
23
June, 2019
21
January, 2019
19
May, 2020
16
August, 2021
16
February, 2018
11
November, 2019
6
October, 2017
5
February, 2021
3
March, 2020
2
September, 2017
Available data
151
bam
151
fastq
149
bigWig
111
bed narrowPeak
33
bed bed3+
31
bigBed narrowPeak
18
bed broadPeak
17
tagAlign
12
bigBed broadPeak
Organism
145
Homo sapiens
Biosample type
64
tissue
48
in vitro differentiated cells
39
primary cell
Organ
61
connective tissue
59
pancreas
18
liver
14
epithelium
13
adipose tissue
Project
151
AMP
Genome assembly (visualization)
173
hg19
151
GRCh38
Lab
151
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
151 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
21
liver
18
pancreas
12
white adipose tissue
12
adipose tissue
1
in vitro differentiated cells
adipocyte
48
primary cell
skeletal muscle myoblast
13
pancreatic endocrine cell
12
pancreatic alpha cell
7
pancreatic beta cell
7
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