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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
52
histone
52
histone modification
narrow histone mark
27
transcription factor
24
broad histone mark
4
chromatin remodeller
2
RNA binding protein
Date released
28
August, 2017
17
September, 2018
2
November, 2017
2
November, 2018
2
October, 2017
Available data
51
bam
51
bigWig
51
fastq
23
bed narrowPeak
11
bed bed3+
6
bigBed narrowPeak
2
tagAlign
1
bed broadPeak
Organism
51
Homo sapiens
Biosample type
21
primary cell
21
tissue
5
in vitro differentiated cells
4
cell line
Organ
28
pancreas
17
connective tissue
12
adipose tissue
10
epithelium
4
liver
2
brain
Project
51
AMP
Genome assembly (visualization)
58
hg19
51
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
51
missing controlled_by
Audit category:
4
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
tissue
white adipose tissue
12
islet of Langerhans
7
brain
2
in vitro differentiated cells
adipocyte
5
cell line
HepG2
4
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