Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
28
histone
28
histone modification
23
transcription factor
14
broad histone mark
14
narrow histone mark
12
chromatin remodeller
5
RNA binding protein
1
recombinant protein
Date released
17
November, 2017
16
August, 2017
11
December, 2017
5
November, 2018
2
February, 2018
October, 2018
Available data
51
bam
51
bed narrowPeak
51
bigWig
51
fastq
28
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
10
bed bed3+
9
tagAlign
Organism
51
Homo sapiens
Biosample type
22
cell line
17
in vitro differentiated cells
5
primary cell
5
tissue
2
stem cell
Organ
23
liver
8
pancreas
6
connective tissue
5
epithelium
3
embryo
Project
51
AMP
Genome assembly (visualization)
55
hg19
51
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
51
inconsistent control read length
7
inconsistent control run_type
4
inconsistent assembly
month_released!
October, 2018
BIOSAMPLE
ASSAY
51 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
22
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
tissue
pancreas
4
liver
1
stem cell
hESC
2
See all biosamples
Download